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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51853661_51856650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51853661 - 51856650

Intron Length:

2990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTTTT

5'SS Class:

major

3'SS Sequence:

TCATCCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTCTCTGTCATC

Flanking Amino Acid:

MLLNTDLHGHNIGKKMTCQE

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.2

83.9

30.3

Major BPS

72.5

0.56

1.2

39.9

Major PPT

81.5

0.71

0.8

73.1

Minor 5ss

42.1

-0.9

57.4

40.7

Minor BPS

47.4

-0.2

2.3

65.01

41.9

Associated Gene:

Gene:

PSD3

Ensembl Gene ID:

ENSAPLG00000002837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002885

51845361 - 51904752

59392

ENSAPLT00000038422

51846627 - 51907819

61193

ENSAPLT00000030056

51847791 - 51908819

61029

ENSAPLT00000025566

51847791 - 51913688

65898