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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51868996_51877803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51868996 - 51877803

Intron Length:

8808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TAAAAAATAATC

Flanking Amino Acid:

SSEFSTKESKALYNSIKNEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

36.9

Major BPS

71.2

0.53

70.3

31.9

Major PPT

85.6

0.8

0.7

80.2

Minor 5ss

32.4

-2

3.3

43.9

Minor BPS

-0.5

1.9

53.23

37.1

Associated Gene:

Gene:

PSD3

Ensembl Gene ID:

ENSAPLG00000002837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046956

51867294 - 51904752

37459