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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5187534_5187966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5187534 - 5187966

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACGTCTT

5'SS Class:

major

3'SS Sequence:

CTTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

TTCATGTAAACT

Flanking Amino Acid:

VKGKRCVFSATLDDCNEHVG

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

75.7

40.3

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

89.9

0.9

0.7

29.4

Minor 5ss

40.8

-1

3.3

58.8

39.9

Minor BPS

47.5

-0.1

2.3

71.55

45.6

Associated Gene:

Gene:

C18orf54

Ensembl Gene ID:

ENSAPLG00000010526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010951

5181664 - 5189941

8278