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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51877848_51884772_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51877848 - 51884772

Intron Length:

6925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

CTTACTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTTTCCTTACTT

Flanking Amino Acid:

SIKNEKLEWAVDEEEKKKSH

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

80.1

34.8

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

72.1

0.5

75.6

33.1

Minor 5ss

41.3

-1

2.8

52.2

44.4

Minor BPS

81.2

1.06

1.5

95.75

Associated Gene:

Gene:

PSD3

Ensembl Gene ID:

ENSAPLG00000002837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030056

51847791 - 51908819

61029

ENSAPLT00000025566

51847791 - 51913688

65898

ENSAPLT00000002885

51845361 - 51904752

59392

ENSAPLT00000046956

51867294 - 51904752

37459

ENSAPLT00000038422

51846627 - 51907819

61193