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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5189888_5189961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5189888 - 5189961

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGCCCT

5'SS Class:

major

3'SS Sequence:

TACGTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

ATTGCTTTTACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

65.1

40.7

Major BPS

74.2

0.6

39.4

Major PPT

0.72

0.9

76.5

37.2

Minor 5ss

36.8

-1.5

3.2

49.3

40.8

Minor BPS

57.7

0.1

1.8

65.35

42.6

Associated Gene:

Gene:

STARD6

Ensembl Gene ID:

ENSAPLG00000021618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024553

5189819 - 5198350

8532