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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5195171_5195499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5195171 - 5195499

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCATCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CAACTGTTAACT

Flanking Amino Acid:

PCGYVCSPLPENPEHSKLVV

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

78.5

0.64

0.8

73.2

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

49.8

0.07

2.1

67.02

43.4

Associated Gene:

Gene:

STARD6

Ensembl Gene ID:

ENSAPLG00000021618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024553

5189819 - 5198350

8532