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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51957802_51959276_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51957802 - 51959276

Intron Length:

1475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCACCATAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TGCACCATAAAG

Flanking Amino Acid:

LTKKKVNRITGLDPAGPTFE

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

0.18

1.1

56.9

37.9

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

48.9

-0.2

1.9

55.63

44.7

Associated Gene:

Gene:

LPL

Ensembl Gene ID:

ENSAPLG00000003392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003487

51949814 - 51965307

15494