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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51959941_51961056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51959941 - 51961056

Intron Length:

1116

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTAATAACA

Flanking Amino Acid:

LKTRAQMPYKVFHYQVKIHF

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.4

33.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.2

0.64

0.9

70.2

41.3

Minor 5ss

34.4

-1.8

4.3

57.3

47.4

Minor BPS

63.5

0.42

1.9

81.45

33.1

Associated Gene:

Gene:

LPL

Ensembl Gene ID:

ENSAPLG00000003392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003487

51949814 - 51965307

15494