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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5197558_5198506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5197558 - 5198506

Intron Length:

949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTATGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

GTTTTATGCACA

Flanking Amino Acid:

PTSGSCKSVQEMEDGSQGEG

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

82.6

0.81

0.8

71.7

Major PPT

74.6

0.55

0.9

68.4

37.1

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

-0.2

2.1

Associated Gene:

Gene:

POLI

Ensembl Gene ID:

ENSAPLG00000010510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010948

5196311 - 5205418

9108

ENSAPLT00000046609

5190892 - 5205418

14527

ENSAPLT00000027923

5196175 - 5205418

9244