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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5198713_5199190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5198713 - 5199190

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGCGTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TTTCTTTCAATT

Flanking Amino Acid:

PPHLVQKFGKESSNIISPLI

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.6

39.1

Major BPS

74.9

0.62

81.3

29.9

Major PPT

82.4

0.73

0.9

80.3

37.3

Minor 5ss

38.8

-1.3

3.6

55.4

48.8

Minor BPS

63.9

0.51

1.5

81.05

34.8

Associated Gene:

Gene:

POLI

Ensembl Gene ID:

ENSAPLG00000010510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010948

5196311 - 5205418

9108

ENSAPLT00000046609

5190892 - 5205418

14527

ENSAPLT00000027923

5196175 - 5205418

9244