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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5201819_5202406_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5201819 - 5202406

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

AGGTGCTGAACA

Flanking Amino Acid:

CVSGHVYNNQAIDLRDTMHV

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.7

1.05

0.6

92.2

16.3

Major BPS

0.42

1.1

57.3

41.7

Major PPT

85.6

0.8

80.7

31.3

Minor 5ss

33.9

-1.8

2.8

41.8

44.8

Minor BPS

52.6

0.08

1.9

63.63

42.3

Associated Gene:

Gene:

POLI

Ensembl Gene ID:

ENSAPLG00000010510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046609

5190892 - 5205418

14527

ENSAPLT00000010948

5196311 - 5205418

9108