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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5204283_5205065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5204283 - 5205065

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGCGCG

5'SS Class:

major

3'SS Sequence:

GCTTTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TAATGTTTAATC

Flanking Amino Acid:

PGPEAAPPAPTGHSKPVPAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.1

50.4

40.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

83.3

0.75

0.8

77.1

31.6

Minor 5ss

32.5

-2

3.3

35.4

Minor BPS

60.8

0.32

1.7

68.05

37.8

Associated Gene:

Gene:

POLI

Ensembl Gene ID:

ENSAPLG00000010510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010948

5196311 - 5205418

9108

ENSAPLT00000046609

5190892 - 5205418

14527

ENSAPLT00000027923

5196175 - 5205418

9244