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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52064235_52099483_R

Intron Information:

Intron Rank:

149511

Intron Class:

major

Intron Phase:

Intron Coordinates:

52064235 - 52099483

Intron Length:

35249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTTCC

5'SS Class:

major

3'SS Sequence:

CTTTACATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TCTTCTTTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

68.5

37.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

81.6

0.71

0.8

78.2

34.6

Minor 5ss

40.2

-1.1

41.8

Minor BPS

64.3

0.53

1.7

80.63

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027952

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030039

52063786 - 52100443

36658