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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52134_58233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

52134 - 58233

Intron Length:

6100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

CCATGCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTGCTTTCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

73.8

0.54

0.9

69.3

36.7

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

56.2

0.27

1.9

74.65

43.4

Associated Gene:

Gene:

RUSC2

Ensembl Gene ID:

ENSAPLG00000023823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038355

26121 - 58339

32219