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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5222745_5229052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5222745 - 5229052

Intron Length:

6308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TATTTCGTATTC

Flanking Amino Acid:

PQRVTEQPRQLFWEKRLQGL

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

92.8

0.96

0.6

88.9

20.3

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

-0

2.2

66.62

39.6

Associated Gene:

Gene:

MBD2

Ensembl Gene ID:

ENSAPLG00000010058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010472

5210419 - 5234922

24504