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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52277170_52421031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52277170 - 52421031

Intron Length:

143862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTCAA

5'SS Class:

major

3'SS Sequence:

TTTATTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATTCTTTTATTT

Flanking Amino Acid:

TQTDVNSSYNTVPPKLKEMK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

64.3

37.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

86.3

0.82

0.7

85.7

28.8

Minor 5ss

30.3

-2.3

2.9

37.7

40.9

Minor BPS

58.4

0.34

1.5

74.96

36.3

Associated Gene:

Gene:

NRG1

Ensembl Gene ID:

ENSAPLG00000014022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044149

52114581 - 52571476

456896

ENSAPLT00000035634

52110345 - 52567677

457333