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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5233210_5234591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

5233210 - 5234591

Intron Length:

1382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TTTTCCAAAAGG

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

49.8

-0.1

2.3

68.11

45.3

Associated Gene:

Gene:

MBD2

Ensembl Gene ID:

ENSAPLG00000010058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010472

5210419 - 5234922

24504