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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5233_5617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5233 - 5617

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGGCTC

5'SS Class:

major

3'SS Sequence:

GTGTGTTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

CGCCTCCCAACC

Flanking Amino Acid:

PGYINAVFANTYTKEDRLII

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.3

67.8

43.5

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

79.2

0.66

72.9

42.2

Minor 5ss

36.7

-1.5

3.5

50.2

39.8

Minor BPS

43.7

-0.5

1.8

49.19

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005719

2781 - 13437

10657