Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52421210 - 52427453

Intron Length:

6244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

PDNVKIPKKQKKYSELHIYR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

NRG1

Ensembl Gene ID:

ENSAPLG00000014022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030012

52388624 - 52667369

278746

ENSAPLT00000042591

52388576 - 52567677

179102

ENSAPLT00000023765

52388624 - 52567677

179054

ENSAPLT00000035634

52110345 - 52567677

457333

ENSAPLT00000044149

52114581 - 52571476

456896

ENSAPLT00000014626

52322186 - 52567677

245492

ENSAPLT00000033250

52407405 - 52571476

164072

ENSAPLT00000044107

52388576 - 52567677

179102

ENSAPLT00000032425

52388624 - 52567677

179054

ENSAPLT00000044032

52388624 - 52571476

182853

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52421210_52427453_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: