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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52544187_52556599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52544187 - 52556599

Intron Length:

12413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTTAA

5'SS Class:

major

3'SS Sequence:

TGTCCCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

ATGTTGTGACCT

Flanking Amino Acid:

TLPMKIQNQEKAEELYQKRV

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

75.7

29.3

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

77.9

0.63

0.8

69.8

36.6

Minor 5ss

47.3

-0.3

2.5

57.4

41.7

Minor BPS

44.7

-0.3

2.3

66.36

44.5

Associated Gene:

Gene:

NRG1

Ensembl Gene ID:

ENSAPLG00000014022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044149

52114581 - 52571476

456896

ENSAPLT00000044107

52388576 - 52567677

179102

ENSAPLT00000033250

52407405 - 52571476

164072