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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52544902_52551294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52544902 - 52551294

Intron Length:

6393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGTCCA

5'SS Class:

major

3'SS Sequence:

TCTGCATTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTTTTGTCAACT

Flanking Amino Acid:

CQNYVMASFYKHLGIEFMEA

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.1

56.8

42.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

0.45

65.6

Minor 5ss

35.6

-1.6

3.1

47.5

41.9

Minor BPS

61.6

0.44

2.2

87.74

37.8

Associated Gene:

Gene:

NRG1

Ensembl Gene ID:

ENSAPLG00000014022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030012

52388624 - 52667369

278746

ENSAPLT00000023765

52388624 - 52567677

179054

ENSAPLT00000044032

52388624 - 52571476

182853

ENSAPLT00000014626

52322186 - 52567677

245492

ENSAPLT00000035634

52110345 - 52567677

457333

ENSAPLT00000032425

52388624 - 52567677

179054