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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52551319_52556599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52551319 - 52556599

Intron Length:

5281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGGACC

5'SS Class:

major

3'SS Sequence:

TGTCCCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

ATGTTGTGACCT

Flanking Amino Acid:

FYKHLGIEFMEAEELYQKRV

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

63.1

41.4

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

77.9

0.63

0.8

69.8

36.6

Minor 5ss

39.2

-1.2

44.3

43.5

Minor BPS

44.7

-0.3

2.3

66.36

44.5

Associated Gene:

Gene:

NRG1

Ensembl Gene ID:

ENSAPLG00000014022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023765

52388624 - 52567677

179054

ENSAPLT00000044032

52388624 - 52571476

182853

ENSAPLT00000014626

52322186 - 52567677

245492

ENSAPLT00000035634

52110345 - 52567677

457333

ENSAPLT00000032425

52388624 - 52567677

179054

ENSAPLT00000030012

52388624 - 52667369

278746