Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52560132 - 52561669

Intron Length:

1538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

GTTTTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

GGTTTGTAAACA

Flanking Amino Acid:

PPPDNVQLVNQYVSKNVISS

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.3

75.3

40.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

90.5

0.91

0.7

28.1

Minor 5ss

38.2

-1.3

51.1

38.4

Minor BPS

-0.1

2.3

64.16

42.3

Associated Gene:

Gene:

NRG1

Ensembl Gene ID:

ENSAPLG00000014022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023765

52388624 - 52567677

179054

ENSAPLT00000035634

52110345 - 52567677

457333

ENSAPLT00000044149

52114581 - 52571476

456896

ENSAPLT00000014626

52322186 - 52567677

245492

ENSAPLT00000033250

52407405 - 52571476

164072

ENSAPLT00000044107

52388576 - 52567677

179102

ENSAPLT00000032425

52388624 - 52567677

179054

ENSAPLT00000044032

52388624 - 52571476

182853

ENSAPLT00000030012

52388624 - 52667369

278746

ENSAPLT00000042591