Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52562521 - 52567025

Intron Length:

4505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCACAC

5'SS Class:

major

3'SS Sequence:

CTCTTTTCGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GTGTCCGCAAAT

Flanking Amino Acid:

DSYRDSPHSERYVSAMTTPA

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.2

57.1

42.4

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

79.4

0.66

0.9

80.3

31.8

Minor 5ss

36.7

-1.5

3.3

50.8

45.7

Minor BPS

47.8

-0

2.3

70.5

45.8

Associated Gene:

Gene:

NRG1

Ensembl Gene ID:

ENSAPLG00000014022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023765

52388624 - 52567677

179054

ENSAPLT00000035634

52110345 - 52567677

457333

ENSAPLT00000044149

52114581 - 52571476

456896

ENSAPLT00000014626

52322186 - 52567677

245492

ENSAPLT00000033250

52407405 - 52571476

164072

ENSAPLT00000044107

52388576 - 52567677

179102

ENSAPLT00000032425

52388624 - 52567677

179054

ENSAPLT00000044032

52388624 - 52571476

182853

ENSAPLT00000030012

52388624 - 52667369

278746

ENSAPLT00000042591