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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52567502_52658489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52567502 - 52658489

Intron Length:

90988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TGGCTCCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATCATCATAATT

Flanking Amino Acid:

SESETEDERIDNASVQLLWN

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

83.9

28.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

64.6

0.33

57.9

37.6

Minor 5ss

30.4

-2.2

3.2

46.4

Minor BPS

55.3

0.25

1.6

71.57

39.6

Associated Gene:

Gene:

NRG1

Ensembl Gene ID:

ENSAPLG00000014022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030012

52388624 - 52667369

278746