Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52659796_52661586_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52659796 - 52661586

Intron Length:

1791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTGTG

5'SS Class:

major

3'SS Sequence:

TCTCCATTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTTCCTTTTATT

Flanking Amino Acid:

VWENIRREEKGWLPQRWSAQ

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

69.2

41.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

72.2

0.5

65.5

40.1

Minor 5ss

35.3

-1.7

3.5

49.3

46.9

Minor BPS

61.1

0.43

1.6

76.99

39.9

Associated Gene:

Gene:

FUT10

Ensembl Gene ID:

ENSAPLG00000013902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043050

52658618 - 52670255

11638

ENSAPLT00000014484

52659571 - 52670930

11360