Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52666480_52668693_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52666480 - 52668693

Intron Length:

2214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGGG

5'SS Class:

major

3'SS Sequence:

TTTTCCCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

TTTCCCCTGAAG

Flanking Amino Acid:

AAFFLMVTFQVITELSDSEN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.1

51.7

45.2

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

75.9

0.58

76.7

25.9

Minor 5ss

27.6

-2.6

3.6

38.4

46.6

Minor BPS

53.2

-0

1.9

66.73

40.4

Associated Gene:

Gene:

FUT10

Ensembl Gene ID:

ENSAPLG00000013902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014484

52659571 - 52670930

11360

ENSAPLT00000043050

52658618 - 52670255

11638