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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52677465_52678321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52677465 - 52678321

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GATTTTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGAAT

U12 Branch Point Sequence:

GAATGCTTGATT

Flanking Amino Acid:

IELNAANYTVWHFRRVLLQS

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

0.3

1.4

71.9

Major PPT

77.9

0.63

72.4

42.2

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

55.8

0.26

1.8

69.39

41.6

Associated Gene:

Gene:

FNTA

Ensembl Gene ID:

ENSAPLG00000013651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014242

52676230 - 52686816

10587