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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52681170_52681597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52681170 - 52681597

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTAT

5'SS Class:

major

3'SS Sequence:

TCCCTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTTCCTTCCCT

Flanking Amino Acid:

AWQHRQWVIQEFKLWENELE

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

70.2

36.1

Major BPS

100

1.24

0.5

100

Major PPT

83.4

0.75

0.7

79.8

25.6

Minor 5ss

44.6

-0.6

3.2

64.1

47.4

Minor BPS

47.4

-0.1

3.6

83.33

44.1

Associated Gene:

Gene:

FNTA

Ensembl Gene ID:

ENSAPLG00000013651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014242

52676230 - 52686816

10587