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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5269886_5270300_F

Intron Information:

Intron Rank:

146963

Intron Class:

major

Intron Phase:

Intron Coordinates:

5269886 - 5270300

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTG

5'SS Class:

strong_major

3'SS Sequence:

GTATTTCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTTTAATGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

80.7

34.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

77.8

0.62

0.9

69.7

41.3

Minor 5ss

43.9

-0.7

2.8

58.4

46.2

Minor BPS

57.1

0.3

1.9

80.74

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036180

5269704 - 5272153

2450

ENSAPLT00000018140

5268754 - 5270514

1761