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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5270529_5271333_F

Intron Information:

Intron Rank:

146965

Intron Class:

major

Intron Phase:

Intron Coordinates:

5270529 - 5271333

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTGTTAGGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

37.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

0.85

0.8

80.2

37.3

Minor 5ss

35.2

-1.7

3.2

41.6

38.8

Minor BPS

39.3

-0.7

2.3

61.08

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036180

5269704 - 5272153

2450