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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52729072_52738360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52729072 - 52738360

Intron Length:

9289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTCTACTTAAAT

Flanking Amino Acid:

MQCILTRVDFDLYYGGEAFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

0.81

0.9

80.4

36.6

Minor 5ss

34.5

-1.8

3.3

46.4

44.2

Minor BPS

71.8

0.76

1.6

86.49

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003141

52727305 - 52738527

11223