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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5274348_5276314_F

Intron Information:

Intron Rank:

141027

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5274348 - 5276314

Intron Length:

1967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCCTAA

5'SS Class:

weak_major

3'SS Sequence:

TATCCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AGATTATTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.2

63.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

86.8

0.83

0.7

84.6

29.7

Minor 5ss

66.8

0.57

Minor BPS

58.1

0.25

1.5

64.5

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018195

5273444 - 5276970

3527