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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52766162_52768163_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52766162 - 52768163

Intron Length:

2002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGAAG

5'SS Class:

major

3'SS Sequence:

CAATCCATTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTTTACTGACCT

Flanking Amino Acid:

YPGHVQPATASPLNNSLLHA

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.9

43.2

Major BPS

74.2

0.6

39.4

Major PPT

65.5

0.35

0.9

55.8

39.4

Minor 5ss

29.6

-2.3

3.4

38.2

Minor BPS

61.5

0.44

1.9

86.18

39.4

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036728

52765818 - 52813948

48131