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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52768301_52769804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52768301 - 52769804

Intron Length:

1504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TTTTTTCTAAGA

Flanking Amino Acid:

KFIVSAWYNMGMTLHKKAAE

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

76.6

33.6

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

0.61

0.8

72.5

32.4

Minor 5ss

31.7

-2.1

3.1

36.4

Minor BPS

57.3

0.23

1.9

75.11

36.7

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036728

52765818 - 52813948

48131

ENSAPLT00000013658

52759619 - 52813948

54330