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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52769877_52769987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52769877 - 52769987

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTAATC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAGTTTTTAATT

Flanking Amino Acid:

ERDRMFHSLEKEYEKTKSQR

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

71.8

38.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

36.7

-1.5

3.3

51.9

44.9

Minor BPS

0.8

1.1

80.11

36.4

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013658

52759619 - 52813948

54330

ENSAPLT00000036728

52765818 - 52813948

48131