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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52770093_52772861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52770093 - 52772861

Intron Length:

2769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTAATTTAAAA

Flanking Amino Acid:

YKKYLEKAKSVIRTLDPKQN

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.3

72.7

44.5

Major BPS

81.6

0.78

0.8

24.9

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

40.3

-1.1

2.8

41.7

Minor BPS

62.1

0.37

1.6

74.65

36.2

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036728

52765818 - 52813948

48131

ENSAPLT00000013658

52759619 - 52813948

54330