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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52783491_52785059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52783491 - 52785059

Intron Length:

1569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TTTTCTATAAAA

Flanking Amino Acid:

LAAEIVTPEIKEKLIRLQHE

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

73.9

32.9

Major BPS

65.3

0.38

71.6

30.1

Major PPT

77.2

0.61

0.9

76.8

37.4

Minor 5ss

44.9

-0.5

2.8

55.6

43.2

Minor BPS

67.9

0.56

1.7

81.76

32.7

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036728

52765818 - 52813948

48131

ENSAPLT00000013658

52759619 - 52813948

54330