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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52792387_52795533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52792387 - 52795533

Intron Length:

3147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACACC

5'SS Class:

major

3'SS Sequence:

TCTGTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

GCTTTCAGAATA

Flanking Amino Acid:

QSLKDEIDVLRHSSDKVAKL

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

63.2

41.5

Major BPS

69.8

0.49

70.3

31.8

Major PPT

79.4

0.66

0.8

70.1

36.5

Minor 5ss

38.9

-1.2

3.1

52.9

Minor BPS

49.5

-0

1.7

61.52

38.6

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036728

52765818 - 52813948

48131

ENSAPLT00000013658

52759619 - 52813948

54330