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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52796434_52797686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52796434 - 52797686

Intron Length:

1253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TATCTCTTAAAA

Flanking Amino Acid:

AQRCHELDMQVAALQEEKSS

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

82.3

32.2

Major BPS

77.8

0.69

78.2

31.8

Major PPT

70.5

0.46

66.9

37.2

Minor 5ss

43.4

-0.7

3.1

60.6

44.5

Minor BPS

69.6

0.61

1.3

75.44

34.9

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036728

52765818 - 52813948

48131

ENSAPLT00000013658

52759619 - 52813948

54330