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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52797771_52798834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52797771 - 52798834

Intron Length:

1064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTAAG

5'SS Class:

major

3'SS Sequence:

TTGTTTATGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTAAACTAAAAA

Flanking Amino Acid:

NDAYIDLDRQLKKTTEELNE

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

70.6

41.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

72.3

0.5

70.7

39.8

Minor 5ss

46.7

-0.3

2.3

59.2

45.4

Minor BPS

48.4

-0.1

63.76

41.7

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036728

52765818 - 52813948

48131

ENSAPLT00000013658

52759619 - 52813948

54330