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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52798898_52806082_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52798898 - 52806082

Intron Length:

7185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCTGG

5'SS Class:

major

3'SS Sequence:

AATCTAATTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTCTAATCC

Flanking Amino Acid:

QHVVMTAIQELMSKESPVSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

62.3

44.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.7

0.49

63.9

40.8

Minor 5ss

49.3

-0

2.5

64.5

46.9

Minor BPS

61.4

0.34

1.9

77.51

38.8

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036728

52765818 - 52813948

48131

ENSAPLT00000013658

52759619 - 52813948

54330