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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52808425_52812065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52808425 - 52812065

Intron Length:

3641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAATA

5'SS Class:

strong_major

3'SS Sequence:

GGTCTTTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GGGTCTTTATGC

Flanking Amino Acid:

LKGILDYNHEILGQQINDFT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

75.2

0.57

69.6

40.7

Minor 5ss

43.1

-0.8

2.9

57.4

46.9

Minor BPS

-0.1

1.9

55.34

43.1

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036728

52765818 - 52813948

48131

ENSAPLT00000013658

52759619 - 52813948

54330