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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52812117_52813865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52812117 - 52813865

Intron Length:

1749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTTGCATTTATT

Flanking Amino Acid:

MALGFLQQMQVSNLKKILKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.9

80.8

Major BPS

76.3

0.65

67.3

39.3

Major PPT

66.6

0.37

63.1

37.5

Minor 5ss

39.8

-1.1

2.9

45.2

Minor BPS

56.7

0.29

81.12

40.6

Associated Gene:

Gene:

HOOK3

Ensembl Gene ID:

ENSAPLG00000013045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013658

52759619 - 52813948

54330

ENSAPLT00000036728

52765818 - 52813948

48131