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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52842401_52853855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52842401 - 52853855

Intron Length:

11455

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTACATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTCTTTTTACAT

Flanking Amino Acid:

TSSLAETCFIRAVMASHQAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.7

92.8

13.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

81.2

0.7

0.8

79.1

33.8

Minor 5ss

23.6

-3

3.9

35.5

41.2

Minor BPS

57.9

0.33

1.7

75.95

41.3

Associated Gene:

Gene:

RNF170

Ensembl Gene ID:

ENSAPLG00000013014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048473

52841909 - 52865474

23566

ENSAPLT00000037763

52841364 - 52865474

24111