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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5285389_5285873_F

Intron Information:

Intron Rank:

138677

Intron Class:

major

Intron Phase:

Intron Coordinates:

5285389 - 5285873

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CATCATATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TGTCACATCATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

66.8

0.42

1.1

37.7

Major PPT

73.5

0.53

0.9

66.2

38.8

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

44.3

-0.4

2.1

59.87

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020439

5284831 - 5286681

1851