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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52858559_52859665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52858559 - 52859665

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTTGC

5'SS Class:

major

3'SS Sequence:

TCTGTCCCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GGATCTTTAATG

Flanking Amino Acid:

ALRQQLQTEQDASAGDRHRF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

66.2

40.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

72.1

0.5

0.9

67.3

33.9

Minor 5ss

39.5

-1.2

53.6

43.4

Minor BPS

66.1

0.37

1.3

61.79

40.2

Associated Gene:

Gene:

RNF170

Ensembl Gene ID:

ENSAPLG00000013014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013546

52852352 - 52865474

13123

ENSAPLT00000048473

52841909 - 52865474

23566

ENSAPLT00000037763

52841364 - 52865474

24111