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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52860854_52863140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52860854 - 52863140

Intron Length:

2287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATAATT

5'SS Class:

major

3'SS Sequence:

CTGCTGTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATGTTCTAAAAT

Flanking Amino Acid:

AIRCPICRQTVTLFLPLFGE

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

77.8

36.7

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

60.8

0.24

53.3

41.5

Minor 5ss

-1.1

3.2

59.6

44.6

Minor BPS

58.3

0.34

1.8

41.8

Associated Gene:

Gene:

RNF170

Ensembl Gene ID:

ENSAPLG00000013014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048473

52841909 - 52865474

23566

ENSAPLT00000037763

52841364 - 52865474

24111

ENSAPLT00000013546

52852352 - 52865474

13123