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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5286266_5294727_F

Intron Information:

Intron Rank:

138679

Intron Class:

major

Intron Phase:

Intron Coordinates:

5286266 - 5294727

Intron Length:

8462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGATCCT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTAATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAA

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

68.7

42.2

Major BPS

57.2

0.18

1.1

58.3

34.3

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

34.8

-1.7

3.3

50.7

45.7

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022800

5285681 - 5297792

12112