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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52863246_52864943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52863246 - 52864943

Intron Length:

1698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

TGTTTCCTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AAAATATTAATC

Flanking Amino Acid:

NRRFSGQPRSIMERIMDLPT

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

72.1

40.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.2

0.63

0.8

73.2

31.8

Minor 5ss

46.7

-0.3

2.8

68.2

42.5

Minor BPS

49.8

-0

1.6

56.86

34.8

Associated Gene:

Gene:

RNF170

Ensembl Gene ID:

ENSAPLG00000013014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048473

52841909 - 52865474

23566

ENSAPLT00000037763

52841364 - 52865474

24111

ENSAPLT00000013546

52852352 - 52865474

13123